OMICS Mass Spectrometry Core Facility

Matějková T, Dodoková A, Kreisinger J, Stopka P, Stopková R. Microbial, proteomic, and metabolomic profiling of the estrous cycle in wild house mice. Microbiol Spectr. 2024 Feb 6;12(2):e0203723. doi: 10.1128/spectrum.02037-23. Epub 2024 Jan 3. PMID: 38171017; PMCID: PMC10846187.

Ramakrishnan R, Roy A, Hradecký J, Kai M,Harant K, Svatoš A and Jirošová A (2024)Juvenile hormone III induction reveals keygenes in general metabolism, pheromonebiosynthesis, and detoxification in Eurasianspruce bark beetle.Front. For. Glob. Change 6:1215813.doi: 10.3389/ffgc.2023.1215813

Gotvaldová K, Špačková J, Novotný J, Baslarová K, Ježek P, Rossmeislová L, Gojda J, Smolková K. BCAA metabolism in pancreatic cancer affects lipid balance by regulating fatty acid import into mitochondria. Cancer Metab. 2024 Mar 26;12(1):10. doi: 10.1186/s40170-024-00335-5. PMID: 38532464.

Meter B, Kratochvíl L, Starostová Z, Kučera T, Kubička L. Complex ontogeny of sexual size dimorphism in a female-larger gecko: Implications of determinate growth for lizard body size and life-history evolution. Evol Dev. 2024 Sep;26(5):e12490. doi: 10.1111/ede.12490. Epub 2024 Aug 11. PMID: 39129398.

Erban T, Kadleckova D, Sopko B, Harant K, Talacko P, Markovic M, Salakova M, Kadlikova K, Tachezy R, Tachezy J. Varroa destructor parasitism and Deformed wing virus infection in honey bees are linked to peroxisome-induced pathways. Proteomics. 2024 May;24(9):e2300312. doi: 10.1002/pmic.202300312. Epub 2024 Mar 6. PMID: 38446070.

Voukali E, Divín D, Samblas MG, Veetil NK, Krajzingrová T, Těšický M, Li T, Melepat B, Talacko P, Vinkler M. Subclinical peripheral inflammation has systemic effects impacting central nervous system proteome in budgerigars. Dev Comp Immunol. 2024 Oct;159:105213. doi: 10.1016/j.dci.2024.105213. Epub 2024 Jun 14. PMID: 38880215.

Míčková K, Jelínek V, Tomášek O, Stopková R, Stopka P, Albrecht T. Proteomic analysis reveals dynamic changes in cloacal fluid composition during the reproductive season in a sexually promiscuous passerine. Sci Rep. 2024 Jun 20;14(1):14259. doi: 10.1038/s41598-024-62244-3. PMID: 38902251; PMCID: PMC11190206.

Sovilj D, Kelemen CD, Dvorakova S, Zobalova R, Raabova H, Kriska J, Hermanova Z, Knotek T, Anderova M, Klener P, Filimonenko V, Neuzil J, Andera L. Cell-specific modulation of mitochondrial respiration and metabolism by the pro-apoptotic Bcl-2 family members Bax and Bak. Apoptosis. 2024 Apr;29(3-4):424-438. doi: 10.1007/s10495-023-01917-2. Epub 2023 Nov 24. PMID: 38001340.

Odenwald J, Gabiatti B, Braune S, Shen S, Zoltner M, Kramer S. Detection of TurboID fusion proteins by fluorescent streptavidin outcompetes antibody signals and visualises targets not accessible to antibodies. Elife. 2024 Aug 29;13:RP95028. doi: 10.7554/eLife.95028. PMID: 39206942; PMCID: PMC11361705.

Turkova T, Kokavec J, Zikmund T, Dibus N, Pimkova K, Nemec D, Holeckova M, Ruskova L, Sedlacek R, Cermak L, Stopka T. Differential requirements for Smarca5 expression during hematopoietic stem cell commitment. Commun Biol. 2024 Feb 29;7(1):244. doi: 10.1038/s42003-024-05917-z. PMID: 38424235; PMCID: PMC10904812.

Sharma P, Maklashina E, Voehler M, Balintova S, Dvorakova S, Kraus M, Hadrava Vanova K, Nahacka Z, Zobalova R, Boukalova S, Cunatova K, Mracek T, Ghayee HK, Pacak K, Rohlena J, Neuzil J, Cecchini G, Iverson TM. Disordered-to-ordered transitions in assembly factors allow the complex II catalytic subunit to switch binding partners. Nat Commun. 2024 Jan 11;15(1):473. doi: 10.1038/s41467-023-44563-7. PMID: 38212624; PMCID: PMC10784507.

Candelas Serra M, Kuchtiak V, Kubik-Zahorodna A, Kysilov B, Fili K, Hrcka Krausova B, Abramova V, Dobrovolski M, Harant K, Bozikova P, Cerny J, Prochazka J, Kasparek P, Sedlacek R, Balik A, Smejkalova T, Vyklicky L. Characterization of Mice Carrying a Neurodevelopmental Disease-Associated GluN2B(L825V) Variant. J Neurosci. 2024 Jul 31;44(31):e2291232024. doi: 10.1523/JNEUROSCI.2291-23.2024. PMID: 38926089; PMCID: PMC11293445.

Cadena LR, Hammond M, Tesařová M, Chmelová Ľ, Svobodová M, Durante IM, Yurchenko V, Lukeš J. A novel nabelschnur protein regulates segregation of the kinetoplast DNA in Trypanosoma brucei. Curr Biol. 2024 Oct 21;34(20):4803-4812.e3. doi: 10.1016/j.cub.2024.08.044. Epub 2024 Sep 24. PMID: 39321796.

Wu BC, Zabelina V, Zurovcova M, Zurovec M. Characterization and comparative analysis of sericin protein 150 in Bombyx mori. Sci Rep. 2024 Sep 9;14(1):20990. doi: 10.1038/s41598-024-71503-2. PMID: 39251726; PMCID: PMC11385562.

Rouhova L, Zurovcova M, Hradilova M, Sery M, Sehadova H, Zurovec M. Comprehensive analysis of silk proteins and gland compartments in Limnephilus lunatus, a case-making trichopteran. BMC Genomics. 2024 May 14;25(1):472. doi: 10.1186/s12864-024-10381-4. PMID: 38745159; PMCID: PMC11092239.

Fang YK, Vaitová Z, Hampl V. A mitochondrion-free eukaryote contains proteins capable of import into an exogenous mitochondrion-related organelle. Open Biol. 2023 Jan;13(1):220238. doi: 10.1098/rsob.220238. Epub 2023 Jan 11. PMID: 36629021; PMCID: PMC9832562.

Otčenášková T, Macíčková E, Vondráková J, Frolíková M, Komrskova K, Stopková R, Stopka P. Proteomic analysis of the mouse sperm acrosome - towards an understanding of an organelle with diverse functionality. Eur J Cell Biol. 2023 Jun;102(2):151296. doi: 10.1016/j.ejcb.2023.151296. Epub 2023 Feb 15. PMID: 36805822.

Harant K, Čajka T, Angelisová P, Pokorná J, Hořejší V. Composition of raft-like cell membrane microdomains resistant to styrene-maleic acid copolymer (SMA) solubilization. Biophys Chem. 2023 May;296:106989. doi: 10.1016/j.bpc.2023.106989. Epub 2023 Mar 5. PMID: 36898346.

Faktorová D, Záhonová K, Benz C, Dacks JB, Field MC, Lukeš J. Functional differentiation of Sec13 paralogues in the euglenozoan protists. Open Biol. 2023 Jun;13(6):220364. doi: 10.1098/rsob.220364. Epub 2023 Jun 14. PMID: 37311539; PMCID: PMC10264103.

Kmet P, Kucerova L, Sehadova H, Chia-Hsiang Wu B, Wu YL, Zurovec M. Identification of silk components in the bombycoid moth Andraca theae (Endromidae) reveals three fibroin subunits resembling those of Bombycidae and Sphingidae. J Insect Physiol. 2023 Jun;147:104523. doi: 10.1016/j.jinsphys.2023.104523. Epub 2023 May 13. PMID: 37187341.

Stopková R, Matějková T, Dodoková A, Talacko P, Zacek P, Sedlacek R, Piálek J, Stopka P. Variation in mouse chemical signals is genetically controlled and environmentally modulated. Sci Rep. 2023 May 26;13(1):8573. doi: 10.1038/s41598-023-35450-8. PMID: 37237091; PMCID: PMC10219973.

Koudelková L, Pelantová M, Brůhová Z, Sztacho M, Pavlík V, Pánek D, Gemperle J, Talacko P, Brábek J, Rösel D. Phosphorylation of tyrosine 90 in SH3 domain is a new regulatory switch controlling Src kinase. Elife. 2023 Jul 10;12:e82428. doi: 10.7554/eLife.82428. PMID: 37428018; PMCID: PMC10361714.

Tereza Otčenášková, Romana Stopková, Aneta Zemanová, Kristýna Míčková, Karel Harant, Oldřich Tomášek, Tomáš Albrecht, and Pavel Stopka "Comparative sperm proteomics in selected passerine birds reflects sperm morphology and mitochondrial metabolism," Journal of Vertebrate Biology 72(23045), 23045.1-14, (11 September 2023). https://doi.org/10.25225/jvb.23045

Motyčková A, Voleman L, Najdrová V, Arbonová L, Benda M, Dohnálek V, Janowicz N, Malych R, Šuťák R, Ettema TJG, Svärd S, Stairs CW, Doležal P. Adaptation of the late ISC pathway in the anaerobic mitochondrial organelles of Giardia intestinalis. PLoS Pathog. 2023 Oct 4;19(10):e1010773. doi: 10.1371/journal.ppat.1010773. PMID: 37792908; PMCID: PMC10578589.

Erban T, Parizkova K, Sopko B, Talacko P, Markovic M, Jarosova J, Votypka J. Imidacloprid increases the prevalence of the intestinal parasite Lotmaria passim in honey bee workers. Sci Total Environ. 2023 Dec 20;905:166973. doi: 10.1016/j.scitotenv.2023.166973. Epub 2023 Sep 11. PMID: 37699488.

Kučerová J, Zdrha A, Shinde A, Harant K, Hrdý I, Tachezy J. The divergent ER-mitochondria encounter structures (ERMES) are conserved in parabasalids but lost in several anaerobic lineages with hydrogenosomes. BMC Biol. 2023 Nov 15;21(1):259. doi: 10.1186/s12915-023-01765-1. PMID: 37968591; PMCID: PMC10648710.

Macholán M, Daniszová K, Hiadlovská Z. The Expansion of House Mouse Major Urinary Protein Genes Likely Did Not Facilitate Commensalism with Humans. Genes (Basel). 2023 Nov 17;14(11):2090. doi: 10.3390/genes14112090. PMID: 38003032; PMCID: PMC10671799.

Sovilj D, Kelemen CD, Dvorakova S, Zobalova R, Raabova H, Kriska J, Hermanova Z, Knotek T, Anderova M, Klener P, Filimonenko V, Neuzil J, Andera L. Cell-specific modulation of mitochondrial respiration and metabolism by the pro-apoptotic Bcl-2 family members Bax and Bak. Apoptosis. 2024 Apr;29(3-4):424-438. doi: 10.1007/s10495-023-01917-2. Epub 2023 Nov 24. PMID: 38001340.

Chmelova M, Androvic P, Kirdajova D, Tureckova J, Kriska J, Valihrach L, Anderova M, Vargova L. A view of the genetic and proteomic profile of extracellular matrix molecules in aging and stroke. Front Cell Neurosci. 2023 Nov 30;17:1296455. doi: 10.3389/fncel.2023.1296455. PMID: 38107409; PMCID: PMC10723838.

Hubert J, Vrtala S, Sopko B, Dowd SE, He Q, Klimov PB, Harant K, Talacko P, Erban T. Predicting Blomia tropicalis allergens using a multiomics approach. Clin Transl Allergy. 2023 Oct;13(10):e12302. doi: 10.1002/clt2.12302. PMID: 37876035; PMCID: PMC10542617.

Vit O, Talacko P, Musil Z, Hartmann I, Pacak K, Petrak J. Identification of potential molecular targets for the treatment of cluster 1 human pheochromocytoma and paraganglioma via comprehensive proteomic characterization. Clin Proteomics. 2023 Sep 25;20(1):39. doi: 10.1186/s12014-023-09428-7. PMID: 37749499; PMCID: PMC10518975.

Princová J, Salat-Canela C, Daněk P, Marešová A, de Cubas L, Bähler J, Ayté J, Hidalgo E, Převorovský M. Perturbed fatty-acid metabolism is linked to localized chromatin hyperacetylation, increased stress-response gene expression and resistance to oxidative stress. PLoS Genet. 2023 Jan 10;19(1):e1010582. doi: 10.1371/journal.pgen.1010582. PMID: 36626368; PMCID: PMC9870116.

Chakraborty A, Zadrapova D, Dvorak J, Faltinova Z, Zacek P, Cajthaml T, Korecky J and Roy A. Impact of 30 years precipitation regime differences on forest soil physiology and microbial assemblages. Front For Glob Change. 2023 June; 6. doi:
10.3389/ffgc.2023.1142979

Ronald Malych, Pavel Stopka, Jan Mach, Eva Kotabová, Ondřej Prášil, Robert Sutak, Flow cytometry-based study of model marine microalgal consortia revealed an ecological advantage of siderophore utilization by the dinoflagellate Amphidinium carterae, Computational and Structural Biotechnology Journal, Volume 20, 2022, Pages 287-295, https://doi.org/10.1016/j.csbj.2021.12.023.

Vondráček O, Mikeš L, Talacko P, Leontovyč R, Bulantová J, Horák P. Differential proteomic analysis of laser-microdissected penetration glands of avian schistosome cercariae with a focus on proteins involved in host invasion. Int J Parasitol. 2022 Feb 23:S0020-7519(22)00017-0. doi: 10.1016/j.ijpara.2021.12.003. Epub ahead of print. PMID: 35218763.

Erban T, Klimov PB, Harant K, Talacko P, Nesvorna M, Hubert J. Label-free proteomic analysis reveals differentially expressed Wolbachia proteins in Tyrophagus putrescentiae: Mite allergens and markers reflecting population-related proteome differences. J Proteomics. 2021 Oct 30;249:104356. doi: 10.1016/j.jprot.2021.104356. Epub 2021 Aug 23. PMID: 34438106.

Vacurova E, Trnovska J, Svoboda P, Skop V, Novosadova V, Reguera DP, Petrezselyová S, Piavaux B, Endaya B, Spoutil F, Zudova D, Stursa J, Melcova M, Bielcikova Z, Werner L, Prochazka J, Sedlacek R, Huttl M, Hubackova SS, Haluzik M, Neuzil J. Mitochondrially targeted tamoxifen alleviates markers of obesity and type 2 diabetes mellitus in mice. Nat Commun. 2022 Apr 6;13(1):1866. doi: 10.1038/s41467-022-29486-z. PMID: 35387987.

Smutná T, Dohnálková A, Sutak R, Narayanasamy RK, Tachezy J, Hrdý I. A cytosolic ferredoxin-independent hydrogenase possibly mediates hydrogen uptake in Trichomonas vaginalis. Curr Biol. 2022 Jan 10;32(1):124-135.e5. doi: 10.1016/j.cub.2021.10.050. Epub 2021 Nov 10. PMID: 34762819.

Bláhová Z, Franěk R, Let M, Bláha M, Pšenička M, Mráz J. Partial fads2 Gene Knockout Diverts LC-PUFA Biosynthesis via an Alternative Δ8 Pathway with an Impact on the Reproduction of Female Zebrafish (Danio rerio). Genes (Basel). 2022 Apr 15;13(4):700. doi: 10.3390/genes13040700. PMID: 35456508; PMCID: PMC9032720.

Magalhaes-Novais S, Blecha J, Naraine R, Mikesova J, Abaffy P, Pecinova A, Milosevic M, Bohuslavova R, Prochazka J, Khan S, Novotna E, Sindelka R, Machan R, Dewerchin M, Vlcak E, Kalucka J, Stemberkova Hubackova S, Benda A, Goveia J, Mracek T, Barinka C, Carmeliet P, Neuzil J, Rohlenova K, Rohlena J. Mitochondrial respiration supports autophagy to provide stress resistance during quiescence. Autophagy. 2022 Oct;18(10):2409-2426. doi: 10.1080/15548627.2022.2038898. Epub 2022 Mar 8. PMID: 35258392; PMCID: PMC9542673.

Erban T, Sopko B, Bodrinova M, Talacko P, Chalupnikova J, Markovic M, Kamler M. Proteomic insight into the interaction of Paenibacillus larvae with honey bee larvae before capping collected from an American foulbrood outbreak: Pathogen proteins within the host, lysis signatures and interaction markers. Proteomics. 2022 Aug 10:e2200146. doi: 10.1002/pmic.202200146. Epub ahead of print. PMID: 35946602.

Volenikova, A., Nguyen, P., Davey, P. et al. Genome sequence and silkomics of the spindle ermine moth, Yponomeuta cagnagella, representing the early diverging lineage of the ditrysian Lepidoptera. Commun Biol 5, 1281 (2022). https://doi.org/10.1038/s42003-022-04240-9

Wu BC-h, Sauman I, Maaroufi HO, Zaloudikova A, Zurovcova M, Kludkiewicz B, Hradilova M and Zurovec M (2022) Characterization of silk genes in Ephestia kuehniella and Galleria mellonella revealed duplication of sericin genes and highly divergent sequences encoding fibroin heavy chains. Front. Mol. Biosci. 9:1023381. doi: 10.3389/fmolb.2022.1023381

Knizkova, D., Pribikova, M., Draberova, H. et al. CMTM4 is a subunit of the IL-17 receptor and mediates autoimmune pathology. Nat Immunol 23, 1644–1652 (2022). https://doi.org/10.1038/s41590-022-01325-9

Vdovin, A., Jelinek, T., Zihala, D. et al. The deubiquitinase OTUD1 regulates immunoglobulin production and proteasome inhibitor sensitivity in multiple myeloma. Nat Commun 13, 6820 (2022). https://doi.org/10.1038/s41467-022-34654-2

Pacakova L, Harant K, Volf P and Lestinova T (2022) Three types of Leishmania mexicana amastigotes: Proteome comparison by quantitative proteomic analysis. Front. Cell. Infect. Microbiol. 12:1022448. doi: 10.3389/fcimb.2022.1022448

Ujcikova, H.; Roubalova, L.; Lee, Y.S.; Slaninova, J.; Brejchova, J.; Svoboda, P. The Dose-Dependent Effects of Multifunctional Enkephalin Analogs on the Protein Composition of Rat Spleen Lymphocytes, Cortex, and Hippocampus; Comparison with Changes Induced by Morphine. Biomedicines 2022, 10, 1969. https://doi.org/10.3390/biomedicines10081969

Zimmann N, Rada P, Žárský V, Smutná T, Záhonová K, Dacks J, Harant K, Hrdý I, Tachezy J. Proteomic Analysis of Trichomonas vaginalis Phagolysosome, Lysosomal Targeting, and Unconventional Secretion of Cysteine Peptidases. Mol Cell Proteomics. 2022 Jan;21(1):100174. doi: 10.1016/j.mcpro.2021.100174. Epub 2021 Nov 8. PMID: 34763061; PMCID: PMC8717582.

Arbon D, Ženíšková K, Šubrtová K, Mach J, Štursa J, Machado M, Zahedifard F, Leštinová T, Hierro-Yap C, Neuzil J, Volf P, Ganter M, Zoltner M, Zíková A, Werner L, Sutak R. Repurposing of MitoTam: Novel Anti-Cancer Drug Candidate Exhibits Potent Activity against Major Protozoan and Fungal Pathogens. Antimicrob Agents Chemother. 2022 Aug 16;66(8):e0072722. doi: 10.1128/aac.00727-22. Epub 2022 Jul 20. PMID: 35856666; PMCID: PMC9380531.

Fry, M.Y., Najdrová, V., Maggiolo, A.O. et al. Structurally derived universal mechanism for the catalytic cycle of the tail-anchored targeting factor Get3. Nat Struct Mol Biol 29, 820–830 (2022). https://doi.org/10.1038/s41594-022-00798-4

Maria Grechnikova, Dominik Arbon, Kateřina Ženíšková, Ronald Malych, Jan Mach, Lucie Krejbichová, Aneta Šimáčková, Robert Sutak,
Elucidation of iron homeostasis in Acanthamoeba castellanii, International Journal for Parasitology, Volume 52, Issue 8, 2022, Pages 497-508, ISSN 0020-7519,
https://doi.org/10.1016/j.ijpara.2022.03.007.

Rada P, Hrdý I, Zdrha A, Narayanasamy RK, Smutná T, Horáčková J, Harant K, Beneš V, Ong S-C, Tsai C-Y, Luo H-W, Chiu C-H, Tang P and Tachezy J (2022) Double-Stranded RNA Viruses Are Released From Trichomonas vaginalis Inside Small Extracellular Vesicles and Modulate the Exosomal Cargo. Front. Microbiol. 13:893692. doi: 10.3389/fmicb.2022.893692

Petrusová, J.; Havalda, R.; Flachs, P.; Venit, T.; Darášová, A.; Hůlková, L.; Sztacho, M.; Hozák, P. Focal Adhesion Protein Vinculin Is Required for Proper Meiotic Progression during Mouse Spermatogenesis. Cells 2022, 11, 2013. https://doi.org/10.3390/cells11132013

Drastichova, Z.; Trubacova, R.; Novotny, J. β-Arrestin2 Is Critically Involved in the Differential Regulation of Phosphosignaling Pathways by Thyrotropin-Releasing Hormone and Taltirelin. Cells 2022, 11, 1473. https://doi.org/10.3390/cells11091473

Ronald Malych, Zoltán Füssy, Kateřina Ženíšková, Dominik Arbon, Vladimír Hampl, Ivan Hrdý, Robert Sutak, The response of Naegleria gruberi to oxidative stress, Metallomics, Volume 14, Issue 3, March 2022, mfac009, https://doi.org/10.1093/mtomcs/mfac009

Ženíšková K, Grechnikova M and Sutak R (2022) Copper Metabolism in Naegleria gruberi and Its Deadly Relative Naegleria fowleri. Front. Cell Dev. Biol. 10:853463. doi: 10.3389/fcell.2022.853463

Stemberkova-Hubackova S, Zobalova R, Dubisova M, Smigova J, Dvorakova S, Korinkova K, Ezrova Z, Endaya B, Blazkova K, Vlcak E, Brisudova P, Le DT, Juhas S, Rosel D, Daniela Kelemen C, Sovilj D, Vacurova E, Cajka T, Filimonenko V, Dong L, Andera L, Hozak P, Brabek J, Bielcikova Z, Stursa J, Werner L, Neuzil J. Simultaneous targeting of mitochondrial metabolism and immune checkpoints as a new strategy for renal cancer therapy. Clin Transl Med. 2022 Mar;12(3):e645. doi: 10.1002/ctm2.645. PMID: 35352502; PMCID: PMC8964933.

Erban, T., Shcherbachenko, E., Talacko, P. et al. Honey proteome of the bumblebee Bombus terrestris: similarities, differences, and exceptionality compared to honey bee honey as signatures of eusociality evolution. Apidologie 53, 16 (2022). https://doi.org/10.1007/s13592-022-00928-3

Jennifer J Tate, Jana Marsikova, Libuse Vachova, Zdena Palkova, Terrance G Cooper, Effects of abolishing Whi2 on the proteome and nitrogen catabolite repression-sensitive protein production, G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab432, https://doi.org/10.1093/g3journal/jkab432

Horáčková V, Voleman L, Hagen KD, Petrů M, Vinopalová M, Weisz F, Janowicz N, Marková L, Motyčková A, Najdrová V, Tůmová P, Dawson SC, Doležal P. Efficient CRISPR/Cas9-mediated gene disruption in the tetraploid protist Giardia intestinalis. Open Biol. 2022 Apr;12(4):210361. doi: 10.1098/rsob.210361. Epub 2022 Apr 27. PMID: 35472287; PMCID: PMC9042576.

Látrová K, Dolejšová T, Motlová L, Mikušová G, Bosák J, Snopková K, Šmajs D, Konopásek I, Fišer R. R-Type Fonticins Produced by Pragia fontium Form Large Pores with High Conductance. J Bacteriol. 2023 Jan 26;205(1):e0031522. doi: 10.1128/jb.00315-22. Epub 2022 Dec 21. PMID: 36541812; PMCID: PMC9879110.

Caspar KR, Stopka P, Issel D, Katschak KH, Zöllner T, Zupanc S, Žáček P, Begall S. Perioral secretions enable complex social signaling in African mole-rats (genus Fukomys). Sci Rep. 2022 Dec 26;12(1):22366. doi: 10.1038/s41598-022-26351-3. PMID: 36572727; PMCID: PMC9792591.

Zítek J, Füssy Z, Treitli SC, Peña-Diaz P, Vaitová Z, Zavadska D, Harant K, Hampl V. Reduced mitochondria provide an essential function for the cytosolic methionine cycle. Curr Biol. 2022 Dec 5;32(23):5057-5068.e5. doi: 10.1016/j.cub.2022.10.028. Epub 2022 Nov 7. PMID: 36347252; PMCID: PMC9746703.

Cejnar P, Smirnova TA, Kuckova S, Prochazka A, Zak I, Harant K, Zakharov S. Acute and chronic blood serum proteome changes in patients with methanol poisoning. Sci Rep. 2022 Dec 9;12(1):21379. doi: 10.1038/s41598-022-25492-9. PMID: 36494437; PMCID: PMC9734099.

Volenikova A, Nguyen P, Davey P, Sehadova H, Kludkiewicz B, Koutecky P, Walters JR, Roessingh P, Provaznikova I, Sery M, Zurovcova M, Hradilova M, Rouhova L, Zurovec M. Genome sequence and silkomics of the spindle ermine moth, Yponomeuta cagnagella, representing the early diverging lineage of the ditrysian Lepidoptera. Commun Biol. 2022 Nov 23;5(1):1281. doi: 10.1038/s42003-022-04240-9. PMID: 36418465; PMCID: PMC9684489.

Wu BC, Sauman I, Maaroufi HO, Zaloudikova A, Zurovcova M, Kludkiewicz B, Hradilova M, Zurovec M. Characterization of silk genes in Ephestia kuehniella and Galleria mellonella revealed duplication of sericin genes and highly divergent sequences encoding fibroin heavy chains. Front Mol Biosci. 2022 Nov 29;9:1023381. doi: 10.3389/fmolb.2022.1023381. PMID: 36523651; PMCID: PMC9745057.

Heneberg P, Simcikova D, Gardas D, Zacek P. New non-canonical function of catalytically dead hexokinase 1 in ovarian cancer., Faseb J. 2022 May; 36(1). doi: 10.1096/fasebj.2022.36.S1.L7635

Dienstbier A, Amman F, Petráčková D, Štipl D, Čapek J, Zavadilová J, Fabiánová K, Držmíšek J, Kumar D, Wildung M, Pouchnik D, Večerek B. Comparative Omics Analysis of Historic and Recent Isolates of Bordetella pertussis and Effects of Genome Rearrangements on Evolution. Emerg Infect Dis. 2021 Jan;27(1):57-68. doi: 10.3201/eid2701.191541. PMID: 33350934; PMCID: PMC7774529.

Drzmisek, J.; Stipl, D.; Petrackova, D.; Vecerek, B.; Dienstbier, A. Omics Analysis of Blood-Responsive Regulon in Bordetella pertussis Identifies a Novel Essential T3SS Substrate. Int. J. Mol. Sci. 2021, 22, 736.

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